BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002B06SP1|AL424910
(1047 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1747 1819 0.0
>3x_Contig1747
Length = 15671
Score = 1819 bits (902), Expect = 0.0
Identities = 1000/1046 (95%), Gaps = 3/1046 (0%)
Strand = Plus / Minus
Query: 3 tcttcatctgtgatgtagatagcggacgcggaagtktttggttctaatgcracaccttct 62
||||||||||| | ||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 3870 tcttcatctgttaagtagatagcggacgcggaagtttttggttctaatgcaacaccttct 3811
Query: 63 gtcgcatccacatcttccagctcatgtraatctgtcaaatctgtcgacttagtatttttc 122
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 3810 gtcgcatccacatcttccagctcatgtaaatctgtcaaatctgtcgacttagtatttttc 3751
Query: 123 aaracaggtcgttggtctacgctgaccttcataaacgatttaggaccatgcgcgakckct 182
|| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 3750 aaaacaggtcgttggtctacgctgaccttcataaacgatttaggaccatgcgcgatctct 3691
Query: 183 gtctcatttgagtktgarttagatttggggcctaagccaccaccagaatacttccttagg 242
||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 3690 gtctcatttgagtttgaattagatttggagcctaagccaccaccagaatacttccttagg 3631
Query: 243 ctttgrtcaggratcgagacatctgagtstttatcatcgaacactctcaagtgattagct 302
||||| ||||| |||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 3630 ctttgatcaggaatcgagacatctgagtctttatcatcgaacactctcaagtaattagct 3571
Query: 303 gcttttctaccatgarttacagarctcttcctgttcctactagactgctgckgtkgcagc 362
||||||||||||||| ||||||| ||||||||||||||||||||||||||| || |||||
Sbjct: 3570 gcttttctaccatgaattacagaactcttcctgttcctactagactgctgctgttgcagc 3511
Query: 363 tgctggttctgaccactaatttggggtggrgggtgccgttgtttgttacaactatcgtcc 422
|||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 3510 tgctggttctgaccactaatttggggtgaaggatgccgttgtttgttacaactatcgtcc 3451
Query: 423 atacttaagtcctgcgagtgagcsgcaaccagagtggtctgttgtgcggcattttcatta 482
|||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 3450 atacttaaatcctgcaagtgagccgcaaccagagtggtctgttgtgcggcattttcatta 3391
Query: 483 gagccatgccgttgtacttgcatctgttgctgttgctgttgctgctgctgc-ggccattr 541
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 3390 gagccatgccgttgtacttgcatctgttgctgttgctgttgctgctgctgcaggccatta 3331
Query: 542 acctcttgctccatgtgtttatraracagcctgtgacaraggattgggaaaccaaaataa 601
|||||||||||||||||||||| | ||||||||| ||| |||||||| ||||||||||||
Sbjct: 3330 acctcttgctccatgtgtttataaaacagcctgtaacaaaggattggaaaaccaaaataa 3271
Query: 602 taacaaarrrgagagtcctgttacaagagataagagaagcgcagatgagaatgagatcac 661
||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 3270 taacaaaaaaaagagtcctgttacaagagataagagaagcgcagatgagaatgaaatcac 3211
Query: 662 agaataatatgagtrcagtgctggctttctttggctcacctggcaaacagcgcgaaccga 721
|||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 3210 agaataatatgaatacagtactggctttctttggctcacctggcaaacagcgcgaaccga 3151
Query: 722 taattgggccagattgaggatatatctattaagatgaattgaaagattgtttttctttat 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3150 taattgggccagattgaggatatatctattaagatgaattgaaagattgtttttctttat 3091
Query: 782 tgatatattagatcaagaagctttaaaaaaaaaaattataacgaaagactgaatactgat 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3090 tgatatattagatcaagaagctttaaaaaaaaaaattataacgaaagactgaatactgat 3031
Query: 842 taaattgaacatggaatagatatcgagatagaaattgaacagatactaaatgtctgatgt 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3030 taaattgaacatggaatagatatcgagatagaaattgaacagatactaaatgtctgatgt 2971
Query: 902 tcactatttctaaatgatgtttcaactgcaggtggccctaatttctgacatgcgaatgtt 961
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2970 tcactatttctaaatgatgtttcaactgcaggtggccctaatttctgacatgcgaatg-t 2912
Query: 962 caagatatgacataacgtccagcagcacctgcacgctacactcttccttttttcagtaaa 1021
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2911 caagatatgacataacgtccagcagcacctgcacgctacactcttcc-tttttcagtaac 2853
Query: 1022 agwagtataaattcattttatgtaga 1047
| ||| |||||||||||||||||||
Sbjct: 2852 ggtagtttaaattcattttatgtaga 2827
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,560
Number of Sequences: 1807
Number of extensions: 12560
Number of successful extensions: 327
Number of sequences better than 1.0e-20: 1
length of query: 1047
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1031
effective length of database: 10,329,639
effective search space: 10649857809
effective search space used: 10649857809
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.3 bits)